DEPRECATED PROJECT. MIGRATED TO PYTHON: https://github.com/seoanezonjic/pets. PETS suite includes three different tools. CohortAnalyzer performs the calculation of several statistics that gives an overview of a cohort of patients to analyse. Reg2Phen uses associations between pathological phenotypes and regions of the genome (these associations can be calculated from the cohort of patients if they include genotypic & phenotypic information using NetAnalyzer, another Ruby gem) to find, for a given genomic region, which pathological phenotypes have been associated with that region. The third tool, Phen2Reg, is a predictor that using the same associations as Reg2Phen, predicts which genomic regions can be the cause of a list of pathological phenotypes observed in a patient.

A tool to automatate my photo workflows

A tool for merging data on PhraseApp with local changes (usually two git revisions)

Utilities for uploading code to Poe

Popart shows you what your site looks like, rendered in a bunch of browsers. Make your own piece of modern art, powered by Ruby, sharing and the letter L. Also Sauce Labs.

Gem dependency prebuilder

Migrate Pull requests from one repo to other

Basic Gem to query URLs in parallel

rotate proxy

Allows for simple parallel execution of rspec tests.

Command-line tool for puma to display information about running request/process. We have replaced the colorize gem by rainbow gem due to GPL license issue.

Helper to process different types of files (JSON, CSV, etc..) line-by-line from the command line

QSpec inserts spec files to a queue. Workers process that queue one by one.

Ruby-based accessibility testing for Jekyll and other static sites

Run a rake task in multiple processes.

Libary for working with neural networks in Ruby.

Light wrapper for RFam data in Ruby.

RbHint is a Ruby code style checking and code formatting tool. It aims to encourage adoption of the community-driven Ruby Style Guide.

Update prototype signature files by heuristic rules

A wrapper around ctags, with search for tag and open file if found.