Help for working with the output of the .delta files produced by nucmer and promer

Tools to find similarity between pangenomes.

Methods for handling multiwell plate annotations, includes ranges and quadrants

Server for polymarker. To be used with cron

Simple classes for parsing SAM, CIGAR and MD:Z strings, including slices. Methods for calling mutations in HGVS format and looking up consequences using Ensembl VEP REST API. Developed for calling mutations at an expected position in an alignment - e.g. Amplicon sequencing of CRISPR-induced mutations.

A minimal web service on the top of sinatra to query bam files

Shogi library

Tabix file indexing routines from the samtools package http://samtools.sourceforge.net/

Bindings to some internals of the velvet assembler.

bipbop is the best service for consulting brazilian data. See http://bipbop.com.br/ for more information.

Count active record instantiations and report them to the log

Simple DSL to build HTML documents

Bisque exists to ease the organizational pain of having to attach reporting and ad-hoc queries to ActiveRecord models in order to get any class-like behavior out of them by providing a new class and DSL for that express purpose.

Ruby wrapper for the BitBucket API

Ruby wrapper for the BitBucket API supporting OAuth and Basic Authentication

Decentralized and trustless communication protocol used to anonymously send encrypted messages via peer-to-peer network

Client library for Bitly API.

Shorten URLs with bit.ly API, make parallel requests.

Official Ruby Bitmap Compiler

Ruby client for Bitodeme REST API