mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms-* gems

Parser for mass spectrometry imaging standard file format. Gem does not check the validity of the input file.

simplified access for obo ontology files. Builds hashes for quick lookup of terms and finds version, etc.

Simulates MS1 runs given amino acid FASTA files. Outputs an MZML file. Can simulate specific data if given an MZML file containing a single isolated peptide peak.

GeneOntology tools to summarize and graph go terms